Scientists discover protist with unusual genetic code

Researchers at the Earlham Institute have identified a previously unknown protist species that reassigns two genetic stop codons to code for amino acids instead, marking a rare departure from the standard rules of life.

The organism, named Oligohymenophorea sp. PL0344, was collected from a freshwater pond at Oxford University Parks during a routine test of a single-cell DNA sequencing method. Dr. Jamie McGowan, a postdoctoral scientist leading the work, described the find as pure chance that revealed how little is known about protist genetics. In this ciliate, the codons TAA and TAG no longer signal the end of a gene but instead specify lysine and glutamic acid, respectively, while only TGA functions as a stop signal.

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Photorealistic depiction of DHX29 protein selectively silencing inefficient mRNA codons in a human cell, illustrating new gene expression research.
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Study identifies DHX29 as a key factor linking codon choice to selective silencing of inefficient genetic messages in human cells

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Researchers at Kyoto University and RIKEN report that human cells can detect “non-optimal” synonymous codons—alternative three-letter genetic instructions that encode the same amino acid but are translated less efficiently—and selectively suppress the corresponding mRNAs. In experiments described in Science, the team identifies the RNA-binding protein DHX29 as a central component of this codon-dependent control of gene expression.

Researchers at the University of York have identified a protein called ESB2 that acts as a molecular shredder, enabling the African trypanosome parasite to evade the human immune system. The parasite, which causes sleeping sickness, uses ESB2 to precisely edit its genetic instructions in real time. This breakthrough solves a 40-year mystery in the parasite's biology.

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Cold Spring Harbor Laboratory researchers report that a feedback circuit involving the proteins MYRF-1 and LIN-42 times organism-wide bursts of gene activity that help drive the roundworm C. elegans through its larval stages.

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